+ Added `make docs` target to primary Makefile to generate documentation
~ Update documentation dependencies
~ Updated `tcl.py` to handle JSON lists of elements including whitespace by joining them with a comma (unless one of the elements already contains a comma), resolving odd JSON syntax
~ Re-organized and re-order configuration variables and edited descriptions for general consistency as well as adding anchors
~ Update all documentation dependencies
~ Fixed a number of broken links
- Remove dependency on `docutils` and `sphinx-autobuild` (both unused)
- Remove two of the custom documentation extensions
